VirSorter: mining viral signal from microbial genomic data
Identifieur interne : 000057 ( Main/Exploration ); précédent : 000056; suivant : 000058VirSorter: mining viral signal from microbial genomic data
Auteurs : Simon Roux [États-Unis] ; Francois Enault [France] ; Bonnie L. Hurwitz [États-Unis] ; Matthew B. Sullivan [États-Unis]Source :
- PeerJ [ 2167-8359 ] ; 2015.
Abstract
Viruses of microbes impact all ecosystems where microbes drive key energy and substrate transformations including the oceans, humans and industrial fermenters. However, despite this recognized importance, our understanding of viral diversity and impacts remains limited by too few model systems and reference genomes. One way to fill these gaps in our knowledge of viral diversity is through the detection of viral signal in microbial genomic data. While multiple approaches have been developed and applied for the detection of prophages (viral genomes integrated in a microbial genome), new types of microbial genomic data are emerging that are more fragmented and larger scale, such as Single-cell Amplified Genomes (SAGs) of uncultivated organisms or genomic fragments assembled from metagenomic sequencing. Here, we present VirSorter, a tool designed to detect viral signal in these different types of microbial sequence data in both a reference-dependent and reference-independent manner, leveraging probabilistic models and extensive virome data to maximize detection of novel viruses. Performance testing shows that VirSorter’s prophage prediction capability compares to that of available prophage predictors for complete genomes, but is superior in predicting viral sequences outside of a host genome (i.e., from extrachromosomal prophages, lytic infections, or partially assembled prophages). Furthermore, VirSorter outperforms existing tools for fragmented genomic and metagenomic datasets, and can identify viral signal in assembled sequence (contigs) as short as 3kb, while providing near-perfect identification (>95% Recall and 100% Precision) on contigs of at least 10kb. Because VirSorter scales to large datasets, it can also be used in “reverse” to more confidently identify viral sequence in viral metagenomes by sorting away cellular DNA whether derived from gene transfer agents, generalized transduction or contamination. Finally, VirSorter is made available through the iPlant Cyberinfrastructure that provides a web-based user interface interconnected with the required computing resources. VirSorter thus complements existing prophage prediction softwares to better leverage fragmented, SAG and metagenomic datasets in a way that will scale to modern sequencing. Given these features, VirSorter should enable the discovery of new viruses in microbial datasets, and further our understanding of uncultivated viral communities across diverse ecosystems.
Url:
DOI: 10.7717/peerj.985
PubMed: 26038737
PubMed Central: 4451026
Affiliations:
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Le document en format XML
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<front><div type="abstract" xml:lang="en"><p>Viruses of microbes impact all ecosystems where microbes drive key energy and substrate transformations including the oceans, humans and industrial fermenters. However, despite this recognized importance, our understanding of viral diversity and impacts remains limited by too few model systems and reference genomes. One way to fill these gaps in our knowledge of viral diversity is through the detection of viral signal in microbial genomic data. While multiple approaches have been developed and applied for the detection of prophages (viral genomes integrated in a microbial genome), new types of microbial genomic data are emerging that are more fragmented and larger scale, such as Single-cell Amplified Genomes (SAGs) of uncultivated organisms or genomic fragments assembled from metagenomic sequencing. Here, we present VirSorter, a tool designed to detect viral signal in these different types of microbial sequence data in both a reference-dependent and reference-independent manner, leveraging probabilistic models and extensive virome data to maximize detection of novel viruses. Performance testing shows that VirSorter’s prophage prediction capability compares to that of available prophage predictors for complete genomes, but is superior in predicting viral sequences outside of a host genome (i.e., from extrachromosomal prophages, lytic infections, or partially assembled prophages). Furthermore, VirSorter outperforms existing tools for fragmented genomic and metagenomic datasets, and can identify viral signal in assembled sequence (contigs) as short as 3kb, while providing near-perfect identification (>95% Recall and 100% Precision) on contigs of at least 10kb. Because VirSorter scales to large datasets, it can also be used in “reverse” to more confidently identify viral sequence in viral metagenomes by sorting away cellular DNA whether derived from gene transfer agents, generalized transduction or contamination. Finally, VirSorter is made available through the iPlant Cyberinfrastructure that provides a web-based user interface interconnected with the required computing resources. VirSorter thus complements existing prophage prediction softwares to better leverage fragmented, SAG and metagenomic datasets in a way that will scale to modern sequencing. Given these features, VirSorter should enable the discovery of new viruses in microbial datasets, and further our understanding of uncultivated viral communities across diverse ecosystems.</p>
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<back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Akhter, S" uniqKey="Akhter S">S Akhter</name>
</author>
<author><name sortKey="Aziz, Rk" uniqKey="Aziz R">RK Aziz</name>
</author>
<author><name sortKey="Edwards, Ra" uniqKey="Edwards R">RA Edwards</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Albertsen, M" uniqKey="Albertsen M">M Albertsen</name>
</author>
<author><name sortKey="Hugenholtz, P" uniqKey="Hugenholtz P">P Hugenholtz</name>
</author>
<author><name sortKey="Skarshewski, A" uniqKey="Skarshewski A">A Skarshewski</name>
</author>
<author><name sortKey="Nielsen, Kl" uniqKey="Nielsen K">KL Nielsen</name>
</author>
<author><name sortKey="Tyson, Gw" uniqKey="Tyson G">GW Tyson</name>
</author>
<author><name sortKey="Nielsen, Ph" uniqKey="Nielsen P">PH Nielsen</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Altschul, Sf" uniqKey="Altschul S">SF Altschul</name>
</author>
<author><name sortKey="Madden, Tl" uniqKey="Madden T">TL Madden</name>
</author>
<author><name sortKey="Sch Ffer, Aa" uniqKey="Sch Ffer A">AA Schäffer</name>
</author>
<author><name sortKey="Zhang, J" uniqKey="Zhang J">J Zhang</name>
</author>
<author><name sortKey="Zhang, Z" uniqKey="Zhang Z">Z Zhang</name>
</author>
<author><name sortKey="Miller, W" uniqKey="Miller W">W Miller</name>
</author>
<author><name sortKey="Lipman, Dj" uniqKey="Lipman D">DJ Lipman</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Anantharaman, K" uniqKey="Anantharaman K">K Anantharaman</name>
</author>
<author><name sortKey="Duhaime, Mb" uniqKey="Duhaime M">MB Duhaime</name>
</author>
<author><name sortKey="Breier, Ja" uniqKey="Breier J">JA Breier</name>
</author>
<author><name sortKey="Wendt, K" uniqKey="Wendt K">K Wendt</name>
</author>
<author><name sortKey="Toner, Bm" uniqKey="Toner B">BM Toner</name>
</author>
<author><name sortKey="Dick, Gj" uniqKey="Dick G">GJ Dick</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Boyd, Ef" uniqKey="Boyd E">EF Boyd</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Breitbart, M" uniqKey="Breitbart M">M Breitbart</name>
</author>
<author><name sortKey="Thompson, Lr" uniqKey="Thompson L">LR Thompson</name>
</author>
<author><name sortKey="Suttle, Ca" uniqKey="Suttle C">CA Suttle</name>
</author>
<author><name sortKey="Sullivan, Mb" uniqKey="Sullivan M">MB Sullivan</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Breitbart, M" uniqKey="Breitbart M">M Breitbart</name>
</author>
<author><name sortKey="Rohwer, F" uniqKey="Rohwer F">F Rohwer</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Brum, Jr" uniqKey="Brum J">JR Brum</name>
</author>
<author><name sortKey="Ignacio Espinoza, Jc" uniqKey="Ignacio Espinoza J">JC Ignacio-Espinoza</name>
</author>
<author><name sortKey="Roux, S" uniqKey="Roux S">S Roux</name>
</author>
<author><name sortKey="Doulcier, G" uniqKey="Doulcier G">G Doulcier</name>
</author>
<author><name sortKey="Acinas, Sg" uniqKey="Acinas S">SG Acinas</name>
</author>
<author><name sortKey="Alberti, A" uniqKey="Alberti A">A Alberti</name>
</author>
<author><name sortKey="Chaffron, S" uniqKey="Chaffron S">S Chaffron</name>
</author>
<author><name sortKey="Coppola, L" uniqKey="Coppola L">L Coppola</name>
</author>
<author><name sortKey="Cruaud, C" uniqKey="Cruaud C">C Cruaud</name>
</author>
<author><name sortKey="De Vargas, C" uniqKey="De Vargas C">C de Vargas</name>
</author>
<author><name sortKey="Gasol, Jm" uniqKey="Gasol J">JM Gasol</name>
</author>
<author><name sortKey="Gorsky, G" uniqKey="Gorsky G">G Gorsky</name>
</author>
<author><name sortKey="Gregory, Ac" uniqKey="Gregory A">AC Gregory</name>
</author>
<author><name sortKey="Guidi, L" uniqKey="Guidi L">L Guidi</name>
</author>
<author><name sortKey="Hingamp, P" uniqKey="Hingamp P">P Hingamp</name>
</author>
<author><name sortKey="Iudicone, D" uniqKey="Iudicone D">D Iudicone</name>
</author>
<author><name sortKey="Not, F" uniqKey="Not F">F Not</name>
</author>
<author><name sortKey="Ogata, H" uniqKey="Ogata H">H Ogata</name>
</author>
<author><name sortKey="Pesant, S" uniqKey="Pesant S">S Pesant</name>
</author>
<author><name sortKey="Poulos, Bt" uniqKey="Poulos B">BT Poulos</name>
</author>
<author><name sortKey="Schwenck, Sm" uniqKey="Schwenck S">SM Schwenck</name>
</author>
<author><name sortKey="Speich, S" uniqKey="Speich S">S Speich</name>
</author>
<author><name sortKey="Dimier, C" uniqKey="Dimier C">C Dimier</name>
</author>
<author><name sortKey="Picheral, M" uniqKey="Picheral M">M Picheral</name>
</author>
<author><name sortKey="Searson, S" uniqKey="Searson S">S Searson</name>
</author>
<author><name sortKey="Kandels Lewis, S" uniqKey="Kandels Lewis S">S Kandels-Lewis</name>
</author>
<author><name sortKey="Coordinators, To" uniqKey="Coordinators T">TO Coordinators</name>
</author>
<author><name sortKey="Bork, P" uniqKey="Bork P">P Bork</name>
</author>
<author><name sortKey="Bowler, C" uniqKey="Bowler C">C Bowler</name>
</author>
<author><name sortKey="Karsenti, E" uniqKey="Karsenti E">E Karsenti</name>
</author>
<author><name sortKey="Sunagawa, S" uniqKey="Sunagawa S">S Sunagawa</name>
</author>
<author><name sortKey="Wincker, P" uniqKey="Wincker P">P Wincker</name>
</author>
<author><name sortKey="Sullivan, Mb" uniqKey="Sullivan M">MB Sullivan</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Brum, Jr" uniqKey="Brum J">JR Brum</name>
</author>
<author><name sortKey="Sullivan, Mb" uniqKey="Sullivan M">MB Sullivan</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Busby, B" uniqKey="Busby B">B Busby</name>
</author>
<author><name sortKey="Kristensen, Dm" uniqKey="Kristensen D">DM Kristensen</name>
</author>
<author><name sortKey="Koonin, Ev" uniqKey="Koonin E">EV Koonin</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Bush, K" uniqKey="Bush K">K Bush</name>
</author>
<author><name sortKey="Courvalin, P" uniqKey="Courvalin P">P Courvalin</name>
</author>
<author><name sortKey="Dantas, G" uniqKey="Dantas G">G Dantas</name>
</author>
<author><name sortKey="Davies, J" uniqKey="Davies J">J Davies</name>
</author>
<author><name sortKey="Eisenstein, B" uniqKey="Eisenstein B">B Eisenstein</name>
</author>
<author><name sortKey="Huovinen, P" uniqKey="Huovinen P">P Huovinen</name>
</author>
<author><name sortKey="Jacoby, Ga" uniqKey="Jacoby G">GA Jacoby</name>
</author>
<author><name sortKey="Kishony, R" uniqKey="Kishony R">R Kishony</name>
</author>
<author><name sortKey="Kreiswirth, Bn" uniqKey="Kreiswirth B">BN Kreiswirth</name>
</author>
<author><name sortKey="Kutter, E" uniqKey="Kutter E">E Kutter</name>
</author>
<author><name sortKey="Lerner, Sa" uniqKey="Lerner S">SA Lerner</name>
</author>
<author><name sortKey="Levy, S" uniqKey="Levy S">S Levy</name>
</author>
<author><name sortKey="Lewis, K" uniqKey="Lewis K">K Lewis</name>
</author>
<author><name sortKey="Lomovskaya, O" uniqKey="Lomovskaya O">O Lomovskaya</name>
</author>
<author><name sortKey="Miller, Jh" uniqKey="Miller J">JH Miller</name>
</author>
<author><name sortKey="Mobashery, S" uniqKey="Mobashery S">S Mobashery</name>
</author>
<author><name sortKey="Piddock, Ljv" uniqKey="Piddock L">LJV Piddock</name>
</author>
<author><name sortKey="Projan, S" uniqKey="Projan S">S Projan</name>
</author>
<author><name sortKey="Thomas, Cm" uniqKey="Thomas C">CM Thomas</name>
</author>
<author><name sortKey="Tomasz, A" uniqKey="Tomasz A">A Tomasz</name>
</author>
<author><name sortKey="Tulkens, Pm" uniqKey="Tulkens P">PM Tulkens</name>
</author>
<author><name sortKey="Walsh, Tr" uniqKey="Walsh T">TR Walsh</name>
</author>
<author><name sortKey="Watson, Jd" uniqKey="Watson J">JD Watson</name>
</author>
<author><name sortKey="Witkowski, J" uniqKey="Witkowski J">J Witkowski</name>
</author>
<author><name sortKey="Witte, W" uniqKey="Witte W">W Witte</name>
</author>
<author><name sortKey="Wright, G" uniqKey="Wright G">G Wright</name>
</author>
<author><name sortKey="Yeh, P" uniqKey="Yeh P">P Yeh</name>
</author>
<author><name sortKey="Zgurskaya, Hi" uniqKey="Zgurskaya H">HI Zgurskaya</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Canchaya, C" uniqKey="Canchaya C">C Canchaya</name>
</author>
<author><name sortKey="Fournous, G" uniqKey="Fournous G">G Fournous</name>
</author>
<author><name sortKey="Brussow, H" uniqKey="Brussow H">H Brüssow</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Casjens, S" uniqKey="Casjens S">S Casjens</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Delcher, Al" uniqKey="Delcher A">AL Delcher</name>
</author>
<author><name sortKey="Salzberg, Sl" uniqKey="Salzberg S">SL Salzberg</name>
</author>
<author><name sortKey="Phillippy, Am" uniqKey="Phillippy A">AM Phillippy</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Eddy, Sr" uniqKey="Eddy S">SR Eddy</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Edwards, Ra" uniqKey="Edwards R">RA Edwards</name>
</author>
<author><name sortKey="Rohwer, F" uniqKey="Rohwer F">F Rohwer</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Emerson, Jb" uniqKey="Emerson J">JB Emerson</name>
</author>
<author><name sortKey="Thomas, Bc" uniqKey="Thomas B">BC Thomas</name>
</author>
<author><name sortKey="Andrade, K" uniqKey="Andrade K">K Andrade</name>
</author>
<author><name sortKey="Allen, Ee" uniqKey="Allen E">EE Allen</name>
</author>
<author><name sortKey="Heidelberg, Kb" uniqKey="Heidelberg K">KB Heidelberg</name>
</author>
<author><name sortKey="Banfield, Jf" uniqKey="Banfield J">JF Banfield</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Enright, Aj" uniqKey="Enright A">AJ Enright</name>
</author>
<author><name sortKey="Van Dongen, S" uniqKey="Van Dongen S">S Van Dongen</name>
</author>
<author><name sortKey="Ouzounis, Ca" uniqKey="Ouzounis C">CA Ouzounis</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Fouts, De" uniqKey="Fouts D">DE Fouts</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Fuhrman, Ja" uniqKey="Fuhrman J">JA Fuhrman</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Goff, Sa" uniqKey="Goff S">SA Goff</name>
</author>
<author><name sortKey="Vaughn, M" uniqKey="Vaughn M">M Vaughn</name>
</author>
<author><name sortKey="Mckay, S" uniqKey="Mckay S">S McKay</name>
</author>
<author><name sortKey="Lyons, E" uniqKey="Lyons E">E Lyons</name>
</author>
<author><name sortKey="Stapleton, Ae" uniqKey="Stapleton A">AE Stapleton</name>
</author>
<author><name sortKey="Gessler, D" uniqKey="Gessler D">D Gessler</name>
</author>
<author><name sortKey="Matasci, N" uniqKey="Matasci N">N Matasci</name>
</author>
<author><name sortKey="Wang, L" uniqKey="Wang L">L Wang</name>
</author>
<author><name sortKey="Hanlon, M" uniqKey="Hanlon M">M Hanlon</name>
</author>
<author><name sortKey="Lenards, A" uniqKey="Lenards A">A Lenards</name>
</author>
<author><name sortKey="Muir, A" uniqKey="Muir A">A Muir</name>
</author>
<author><name sortKey="Merchant, N" uniqKey="Merchant N">N Merchant</name>
</author>
<author><name sortKey="Lowry, S" uniqKey="Lowry S">S Lowry</name>
</author>
<author><name sortKey="Mock, S" uniqKey="Mock S">S Mock</name>
</author>
<author><name sortKey="Helmke, M" uniqKey="Helmke M">M Helmke</name>
</author>
<author><name sortKey="Kubach, A" uniqKey="Kubach A">A Kubach</name>
</author>
<author><name sortKey="Narro, M" uniqKey="Narro M">M Narro</name>
</author>
<author><name sortKey="Hopkins, N" uniqKey="Hopkins N">N Hopkins</name>
</author>
<author><name sortKey="Micklos, D" uniqKey="Micklos D">D Micklos</name>
</author>
<author><name sortKey="Hilgert, U" uniqKey="Hilgert U">U Hilgert</name>
</author>
<author><name sortKey="Gonzales, M" uniqKey="Gonzales M">M Gonzales</name>
</author>
<author><name sortKey="Jordan, C" uniqKey="Jordan C">C Jordan</name>
</author>
<author><name sortKey="Skidmore, E" uniqKey="Skidmore E">E Skidmore</name>
</author>
<author><name sortKey="Dooley, R" uniqKey="Dooley R">R Dooley</name>
</author>
<author><name sortKey="Cazes, J" uniqKey="Cazes J">J Cazes</name>
</author>
<author><name sortKey="Mclay, R" uniqKey="Mclay R">R McLay</name>
</author>
<author><name sortKey="Lu, Z" uniqKey="Lu Z">Z Lu</name>
</author>
<author><name sortKey="Pasternak, S" uniqKey="Pasternak S">S Pasternak</name>
</author>
<author><name sortKey="Koesterke, L" uniqKey="Koesterke L">L Koesterke</name>
</author>
<author><name sortKey="Piel, Wh" uniqKey="Piel W">WH Piel</name>
</author>
<author><name sortKey="Grene, R" uniqKey="Grene R">R Grene</name>
</author>
<author><name sortKey="Noutsos, C" uniqKey="Noutsos C">C Noutsos</name>
</author>
<author><name sortKey="Gendler, K" uniqKey="Gendler K">K Gendler</name>
</author>
<author><name sortKey="Feng, X" uniqKey="Feng X">X Feng</name>
</author>
<author><name sortKey="Tang, C" uniqKey="Tang C">C Tang</name>
</author>
<author><name sortKey="Lent, M" uniqKey="Lent M">M Lent</name>
</author>
<author><name sortKey="Kim, S J" uniqKey="Kim S">S-J Kim</name>
</author>
<author><name sortKey="Kvilekval, K" uniqKey="Kvilekval K">K Kvilekval</name>
</author>
<author><name sortKey="Manjunath, Bs" uniqKey="Manjunath B">BS Manjunath</name>
</author>
<author><name sortKey="Tannen, V" uniqKey="Tannen V">V Tannen</name>
</author>
<author><name sortKey="Stamatakis, A" uniqKey="Stamatakis A">A Stamatakis</name>
</author>
<author><name sortKey="Sanderson, M" uniqKey="Sanderson M">M Sanderson</name>
</author>
<author><name sortKey="Welch, Sm" uniqKey="Welch S">SM Welch</name>
</author>
<author><name sortKey="Cranston, Ka" uniqKey="Cranston K">KA Cranston</name>
</author>
<author><name sortKey="Soltis, P" uniqKey="Soltis P">P Soltis</name>
</author>
<author><name sortKey="Soltis, D" uniqKey="Soltis D">D Soltis</name>
</author>
<author><name sortKey="O Eara, B" uniqKey="O Eara B">B O’Meara</name>
</author>
<author><name sortKey="Ane, C" uniqKey="Ane C">C Ane</name>
</author>
<author><name sortKey="Brutnell, T" uniqKey="Brutnell T">T Brutnell</name>
</author>
<author><name sortKey="Kleibenstein, Dj" uniqKey="Kleibenstein D">DJ Kleibenstein</name>
</author>
<author><name sortKey="White, Jw" uniqKey="White J">JW White</name>
</author>
<author><name sortKey="Leebens Mack, J" uniqKey="Leebens Mack J">J Leebens-Mack</name>
</author>
<author><name sortKey="Donoghue, Mj" uniqKey="Donoghue M">MJ Donoghue</name>
</author>
<author><name sortKey="Spalding, Ep" uniqKey="Spalding E">EP Spalding</name>
</author>
<author><name sortKey="Vision, Tj" uniqKey="Vision T">TJ Vision</name>
</author>
<author><name sortKey="Myers, Cr" uniqKey="Myers C">CR Myers</name>
</author>
<author><name sortKey="Lowenthal, D" uniqKey="Lowenthal D">D Lowenthal</name>
</author>
<author><name sortKey="Enquist, Bj" uniqKey="Enquist B">BJ Enquist</name>
</author>
<author><name sortKey="Boyle, B" uniqKey="Boyle B">B Boyle</name>
</author>
<author><name sortKey="Akoglu, A" uniqKey="Akoglu A">A Akoglu</name>
</author>
<author><name sortKey="Andrews, G" uniqKey="Andrews G">G Andrews</name>
</author>
<author><name sortKey="Ram, S" uniqKey="Ram S">S Ram</name>
</author>
<author><name sortKey="Ware, D" uniqKey="Ware D">D Ware</name>
</author>
<author><name sortKey="Stein, L" uniqKey="Stein L">L Stein</name>
</author>
<author><name sortKey="Stanzione, D" uniqKey="Stanzione D">D Stanzione</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Hurwitz, Bl" uniqKey="Hurwitz B">BL Hurwitz</name>
</author>
<author><name sortKey="Brum, Jr" uniqKey="Brum J">JR Brum</name>
</author>
<author><name sortKey="Sullivan, Mb" uniqKey="Sullivan M">MB Sullivan</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Hurwitz, Bl" uniqKey="Hurwitz B">BL Hurwitz</name>
</author>
<author><name sortKey="Hallam, Sj" uniqKey="Hallam S">SJ Hallam</name>
</author>
<author><name sortKey="Sullivan, Mb" uniqKey="Sullivan M">MB Sullivan</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Jia, B" uniqKey="Jia B">B Jia</name>
</author>
<author><name sortKey="Xuan, L" uniqKey="Xuan L">L Xuan</name>
</author>
<author><name sortKey="Cai, K" uniqKey="Cai K">K Cai</name>
</author>
<author><name sortKey="Hu, Z" uniqKey="Hu Z">Z Hu</name>
</author>
<author><name sortKey="Ma, L" uniqKey="Ma L">L Ma</name>
</author>
<author><name sortKey="Wei, C" uniqKey="Wei C">C Wei</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Kamke, J" uniqKey="Kamke J">J Kamke</name>
</author>
<author><name sortKey="Sczyrba, A" uniqKey="Sczyrba A">A Sczyrba</name>
</author>
<author><name sortKey="Ivanova, N" uniqKey="Ivanova N">N Ivanova</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Kashtan, N" uniqKey="Kashtan N">N Kashtan</name>
</author>
<author><name sortKey="Roggensack, Se" uniqKey="Roggensack S">SE Roggensack</name>
</author>
<author><name sortKey="Rodrigue, S" uniqKey="Rodrigue S">S Rodrigue</name>
</author>
<author><name sortKey="Thompson, Jw" uniqKey="Thompson J">JW Thompson</name>
</author>
<author><name sortKey="Biller, Sj" uniqKey="Biller S">SJ Biller</name>
</author>
<author><name sortKey="Coe, A" uniqKey="Coe A">A Coe</name>
</author>
<author><name sortKey="Ding, H" uniqKey="Ding H">H Ding</name>
</author>
<author><name sortKey="Marttinen, P" uniqKey="Marttinen P">P Marttinen</name>
</author>
<author><name sortKey="Malmstrom, Rr" uniqKey="Malmstrom R">RR Malmstrom</name>
</author>
<author><name sortKey="Stocker, R" uniqKey="Stocker R">R Stocker</name>
</author>
<author><name sortKey="Follows, Mj" uniqKey="Follows M">MJ Follows</name>
</author>
<author><name sortKey="Stepanauskas, R" uniqKey="Stepanauskas R">R Stepanauskas</name>
</author>
<author><name sortKey="Chisholm, Sw" uniqKey="Chisholm S">SW Chisholm</name>
</author>
<author><name sortKey="Biller, J" uniqKey="Biller J">J Biller</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Koonin, Ev" uniqKey="Koonin E">EV Koonin</name>
</author>
<author><name sortKey="Senkevich, Tg" uniqKey="Senkevich T">TG Senkevich</name>
</author>
<author><name sortKey="Dolja, Vv" uniqKey="Dolja V">VV Dolja</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Labonte, Jm" uniqKey="Labonte J">JM Labonté</name>
</author>
<author><name sortKey="Swan, Bk" uniqKey="Swan B">BK Swan</name>
</author>
<author><name sortKey="Poulos, Bt" uniqKey="Poulos B">BT Poulos</name>
</author>
<author><name sortKey="Luo, H" uniqKey="Luo H">H Luo</name>
</author>
<author><name sortKey="Koren, S" uniqKey="Koren S">S Koren</name>
</author>
<author><name sortKey="Hallam, Sj" uniqKey="Hallam S">SJ Hallam</name>
</author>
<author><name sortKey="Sullivan, Mb" uniqKey="Sullivan M">MB Sullivan</name>
</author>
<author><name sortKey="Woyke, T" uniqKey="Woyke T">T Woyke</name>
</author>
<author><name sortKey="Wommack, Ek" uniqKey="Wommack E">EK Wommack</name>
</author>
<author><name sortKey="Stepanauskas, R" uniqKey="Stepanauskas R">R Stepanauskas</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Letarov, A" uniqKey="Letarov A">A Letarov</name>
</author>
<author><name sortKey="Kulikov, E" uniqKey="Kulikov E">E Kulikov</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Lima Mendez, G" uniqKey="Lima Mendez G">G Lima-Mendez</name>
</author>
<author><name sortKey="Van Helden, J" uniqKey="Van Helden J">J Van Helden</name>
</author>
<author><name sortKey="Toussaint, A" uniqKey="Toussaint A">A Toussaint</name>
</author>
<author><name sortKey="Leplae, R" uniqKey="Leplae R">R Leplae</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Lindell, D" uniqKey="Lindell D">D Lindell</name>
</author>
<author><name sortKey="Jaffe, Jd" uniqKey="Jaffe J">JD Jaffe</name>
</author>
<author><name sortKey="Johnson, Zi" uniqKey="Johnson Z">ZI Johnson</name>
</author>
<author><name sortKey="Church, Gm" uniqKey="Church G">GM Church</name>
</author>
<author><name sortKey="Chisholm, Sw" uniqKey="Chisholm S">SW Chisholm</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Minot, S" uniqKey="Minot S">S Minot</name>
</author>
<author><name sortKey="Bryson, A" uniqKey="Bryson A">A Bryson</name>
</author>
<author><name sortKey="Chehoud, C" uniqKey="Chehoud C">C Chehoud</name>
</author>
<author><name sortKey="Wu, Gd" uniqKey="Wu G">GD Wu</name>
</author>
<author><name sortKey="Lewis, Jd" uniqKey="Lewis J">JD Lewis</name>
</author>
<author><name sortKey="Bushman, Fd" uniqKey="Bushman F">FD Bushman</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Narasingarao, P" uniqKey="Narasingarao P">P Narasingarao</name>
</author>
<author><name sortKey="Podell, S" uniqKey="Podell S">S Podell</name>
</author>
<author><name sortKey="Ugalde, Ja" uniqKey="Ugalde J">JA Ugalde</name>
</author>
<author><name sortKey="Brochier Armanet, C" uniqKey="Brochier Armanet C">C Brochier-Armanet</name>
</author>
<author><name sortKey="Emerson, Jb" uniqKey="Emerson J">JB Emerson</name>
</author>
<author><name sortKey="Brocks, Jj" uniqKey="Brocks J">JJ Brocks</name>
</author>
<author><name sortKey="Heidelberg, Kb" uniqKey="Heidelberg K">KB Heidelberg</name>
</author>
<author><name sortKey="Banfield, Jf" uniqKey="Banfield J">JF Banfield</name>
</author>
<author><name sortKey="Allen, Ee" uniqKey="Allen E">EE Allen</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Nobrega, Fl" uniqKey="Nobrega F">FL Nobrega</name>
</author>
<author><name sortKey="Costa, Ar" uniqKey="Costa A">AR Costa</name>
</author>
<author><name sortKey="Kluskens, Ld" uniqKey="Kluskens L">LD Kluskens</name>
</author>
<author><name sortKey="Azeredo, J" uniqKey="Azeredo J">J Azeredo</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Noguchi, H" uniqKey="Noguchi H">H Noguchi</name>
</author>
<author><name sortKey="Taniguchi, T" uniqKey="Taniguchi T">T Taniguchi</name>
</author>
<author><name sortKey="Itoh, T" uniqKey="Itoh T">T Itoh</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Peng, Y" uniqKey="Peng Y">Y Peng</name>
</author>
<author><name sortKey="Leung, Hcm" uniqKey="Leung H">HCM Leung</name>
</author>
<author><name sortKey="Yiu, Sm" uniqKey="Yiu S">SM Yiu</name>
</author>
<author><name sortKey="Chin, Fyl" uniqKey="Chin F">FYL Chin</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Pride, Dt" uniqKey="Pride D">DT Pride</name>
</author>
<author><name sortKey="Salzman, J" uniqKey="Salzman J">J Salzman</name>
</author>
<author><name sortKey="Haynes, M" uniqKey="Haynes M">M Haynes</name>
</author>
<author><name sortKey="Rohwer, F" uniqKey="Rohwer F">F Rohwer</name>
</author>
<author><name sortKey="Davis Long, C" uniqKey="Davis Long C">C Davis-Long</name>
</author>
<author><name sortKey="White, Ra" uniqKey="White R">RA White</name>
</author>
<author><name sortKey="Loomer, P" uniqKey="Loomer P">P Loomer</name>
</author>
<author><name sortKey="Armitage, Gc" uniqKey="Armitage G">GC Armitage</name>
</author>
<author><name sortKey="Relman, Da" uniqKey="Relman D">DA Relman</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Rappe, Ms" uniqKey="Rappe M">MS Rappé</name>
</author>
<author><name sortKey="Giovannoni, Sj" uniqKey="Giovannoni S">SJ Giovannoni</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Reyes, A" uniqKey="Reyes A">A Reyes</name>
</author>
<author><name sortKey="Haynes, M" uniqKey="Haynes M">M Haynes</name>
</author>
<author><name sortKey="Hanson, N" uniqKey="Hanson N">N Hanson</name>
</author>
<author><name sortKey="Angly, Fe" uniqKey="Angly F">FE Angly</name>
</author>
<author><name sortKey="Heath, Ac" uniqKey="Heath A">AC Heath</name>
</author>
<author><name sortKey="Rohwer, F" uniqKey="Rohwer F">F Rohwer</name>
</author>
<author><name sortKey="Gordon, Ji" uniqKey="Gordon J">JI Gordon</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Reyes, A" uniqKey="Reyes A">A Reyes</name>
</author>
<author><name sortKey="Semenkovich, Np" uniqKey="Semenkovich N">NP Semenkovich</name>
</author>
<author><name sortKey="Whiteson, K" uniqKey="Whiteson K">K Whiteson</name>
</author>
<author><name sortKey="Rohwer, F" uniqKey="Rohwer F">F Rohwer</name>
</author>
<author><name sortKey="Gordon, Ji" uniqKey="Gordon J">JI Gordon</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Rinke, C" uniqKey="Rinke C">C Rinke</name>
</author>
<author><name sortKey="Schwientek, P" uniqKey="Schwientek P">P Schwientek</name>
</author>
<author><name sortKey="Sczyrba, A" uniqKey="Sczyrba A">A Sczyrba</name>
</author>
<author><name sortKey="Ivanova, Nn" uniqKey="Ivanova N">NN Ivanova</name>
</author>
<author><name sortKey="Anderson, Ij" uniqKey="Anderson I">IJ Anderson</name>
</author>
<author><name sortKey="Cheng, J F" uniqKey="Cheng J">J-F Cheng</name>
</author>
<author><name sortKey="Darling, A" uniqKey="Darling A">A Darling</name>
</author>
<author><name sortKey="Malfatti, S" uniqKey="Malfatti S">S Malfatti</name>
</author>
<author><name sortKey="Swan, Bk" uniqKey="Swan B">BK Swan</name>
</author>
<author><name sortKey="Gies, Ea" uniqKey="Gies E">EA Gies</name>
</author>
<author><name sortKey="Dodsworth, Ja" uniqKey="Dodsworth J">JA Dodsworth</name>
</author>
<author><name sortKey="Hedlund, Bp" uniqKey="Hedlund B">BP Hedlund</name>
</author>
<author><name sortKey="Tsiamis, G" uniqKey="Tsiamis G">G Tsiamis</name>
</author>
<author><name sortKey="Sievert, Sm" uniqKey="Sievert S">SM Sievert</name>
</author>
<author><name sortKey="Liu, W T" uniqKey="Liu W">W-T Liu</name>
</author>
<author><name sortKey="Eisen, Ja" uniqKey="Eisen J">JA Eisen</name>
</author>
<author><name sortKey="Hallam, Sj" uniqKey="Hallam S">SJ Hallam</name>
</author>
<author><name sortKey="Kyrpides, Nc" uniqKey="Kyrpides N">NC Kyrpides</name>
</author>
<author><name sortKey="Stepanauskas, R" uniqKey="Stepanauskas R">R Stepanauskas</name>
</author>
<author><name sortKey="Rubin, Em" uniqKey="Rubin E">EM Rubin</name>
</author>
<author><name sortKey="Hugenholtz, P" uniqKey="Hugenholtz P">P Hugenholtz</name>
</author>
<author><name sortKey="Woyke, T" uniqKey="Woyke T">T Woyke</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Rodriguez Valera, F" uniqKey="Rodriguez Valera F">F Rodriguez-Valera</name>
</author>
<author><name sortKey="Martin Cuadrado, A B" uniqKey="Martin Cuadrado A">A-B Martin-Cuadrado</name>
</author>
<author><name sortKey="Rodriguez Brito, B" uniqKey="Rodriguez Brito B">B Rodriguez-Brito</name>
</author>
<author><name sortKey="Pasi, L" uniqKey="Pasi L">L Pasić</name>
</author>
<author><name sortKey="Thingstad, Tf" uniqKey="Thingstad T">TF Thingstad</name>
</author>
<author><name sortKey="Rohwer, F" uniqKey="Rohwer F">F Rohwer</name>
</author>
<author><name sortKey="Mira, A" uniqKey="Mira A">A Mira</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Rohwer, F" uniqKey="Rohwer F">F Rohwer</name>
</author>
<author><name sortKey="Thurber, Rv" uniqKey="Thurber R">RV Thurber</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Roux, S" uniqKey="Roux S">S Roux</name>
</author>
<author><name sortKey="Krupovic, M" uniqKey="Krupovic M">M Krupovic</name>
</author>
<author><name sortKey="Debroas, D" uniqKey="Debroas D">D Debroas</name>
</author>
<author><name sortKey="Forterre, P" uniqKey="Forterre P">P Forterre</name>
</author>
<author><name sortKey="Enault, F" uniqKey="Enault F">F Enault</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Roux, S" uniqKey="Roux S">S Roux</name>
</author>
<author><name sortKey="Tournayre, J" uniqKey="Tournayre J">J Tournayre</name>
</author>
<author><name sortKey="Mahul, A" uniqKey="Mahul A">A Mahul</name>
</author>
<author><name sortKey="Debroas, D" uniqKey="Debroas D">D Debroas</name>
</author>
<author><name sortKey="Enault, F" uniqKey="Enault F">F Enault</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Roux, S" uniqKey="Roux S">S Roux</name>
</author>
<author><name sortKey="Hawley, Ak" uniqKey="Hawley A">AK Hawley</name>
</author>
<author><name sortKey="Torres Beltran, M" uniqKey="Torres Beltran M">M Torres Beltran</name>
</author>
<author><name sortKey="Scofield, M" uniqKey="Scofield M">M Scofield</name>
</author>
<author><name sortKey="Schwientek, P" uniqKey="Schwientek P">P Schwientek</name>
</author>
<author><name sortKey="Stepanauskas, R" uniqKey="Stepanauskas R">R Stepanauskas</name>
</author>
<author><name sortKey="Woyke, T" uniqKey="Woyke T">T Woyke</name>
</author>
<author><name sortKey="Hallam, Sj" uniqKey="Hallam S">SJ Hallam</name>
</author>
<author><name sortKey="Sullivan, Mb" uniqKey="Sullivan M">MB Sullivan</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Sharon, I" uniqKey="Sharon I">I Sharon</name>
</author>
<author><name sortKey="Alperovitch, A" uniqKey="Alperovitch A">A Alperovitch</name>
</author>
<author><name sortKey="Rohwer, F" uniqKey="Rohwer F">F Rohwer</name>
</author>
<author><name sortKey="Haynes, M" uniqKey="Haynes M">M Haynes</name>
</author>
<author><name sortKey="Glaser, F" uniqKey="Glaser F">F Glaser</name>
</author>
<author><name sortKey="Atamna Ismaeel, N" uniqKey="Atamna Ismaeel N">N Atamna-Ismaeel</name>
</author>
<author><name sortKey="Pinter, Ry" uniqKey="Pinter R">RY Pinter</name>
</author>
<author><name sortKey="Partensky, F" uniqKey="Partensky F">F Partensky</name>
</author>
<author><name sortKey="Koonin, Ev" uniqKey="Koonin E">EV Koonin</name>
</author>
<author><name sortKey="Wolf, Yi" uniqKey="Wolf Y">YI Wolf</name>
</author>
<author><name sortKey="Nelson, N" uniqKey="Nelson N">N Nelson</name>
</author>
<author><name sortKey="Beja, O" uniqKey="Beja O">O Béjà</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Sharon, I" uniqKey="Sharon I">I Sharon</name>
</author>
<author><name sortKey="Battchikova, N" uniqKey="Battchikova N">N Battchikova</name>
</author>
<author><name sortKey="Aro, E M" uniqKey="Aro E">E-M Aro</name>
</author>
<author><name sortKey="Giglione, C" uniqKey="Giglione C">C Giglione</name>
</author>
<author><name sortKey="Meinnel, T" uniqKey="Meinnel T">T Meinnel</name>
</author>
<author><name sortKey="Glaser, F" uniqKey="Glaser F">F Glaser</name>
</author>
<author><name sortKey="Pinter, Ry" uniqKey="Pinter R">RY Pinter</name>
</author>
<author><name sortKey="Breitbart, M" uniqKey="Breitbart M">M Breitbart</name>
</author>
<author><name sortKey="Rohwer, F" uniqKey="Rohwer F">F Rohwer</name>
</author>
<author><name sortKey="Beja, O" uniqKey="Beja O">O Béjà</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Sullivan, Mb" uniqKey="Sullivan M">MB Sullivan</name>
</author>
<author><name sortKey="Lindell, D" uniqKey="Lindell D">D Lindell</name>
</author>
<author><name sortKey="Lee, Ja" uniqKey="Lee J">JA Lee</name>
</author>
<author><name sortKey="Thompson, Lr" uniqKey="Thompson L">LR Thompson</name>
</author>
<author><name sortKey="Bielawski, Jp" uniqKey="Bielawski J">JP Bielawski</name>
</author>
<author><name sortKey="Chisholm, Sw" uniqKey="Chisholm S">SW Chisholm</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Suttle, C" uniqKey="Suttle C">C Suttle</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Suttle, Ca" uniqKey="Suttle C">CA Suttle</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Swan, Bk" uniqKey="Swan B">BK Swan</name>
</author>
<author><name sortKey="Martinez Garcia, M" uniqKey="Martinez Garcia M">M Martinez-Garcia</name>
</author>
<author><name sortKey="Preston, Cm" uniqKey="Preston C">CM Preston</name>
</author>
<author><name sortKey="Sczyrba, A" uniqKey="Sczyrba A">A Sczyrba</name>
</author>
<author><name sortKey="Woyke, T" uniqKey="Woyke T">T Woyke</name>
</author>
<author><name sortKey="Lamy, D" uniqKey="Lamy D">D Lamy</name>
</author>
<author><name sortKey="Reinthaler, T" uniqKey="Reinthaler T">T Reinthaler</name>
</author>
<author><name sortKey="Poulton, Nj" uniqKey="Poulton N">NJ Poulton</name>
</author>
<author><name sortKey="Masland, Edp" uniqKey="Masland E">EDP Masland</name>
</author>
<author><name sortKey="Gomez, Ml" uniqKey="Gomez M">ML Gomez</name>
</author>
<author><name sortKey="Sieracki, Me" uniqKey="Sieracki M">ME Sieracki</name>
</author>
<author><name sortKey="Delong, Ef" uniqKey="Delong E">EF DeLong</name>
</author>
<author><name sortKey="Herndl, Gj" uniqKey="Herndl G">GJ Herndl</name>
</author>
<author><name sortKey="Stepanauskas, R" uniqKey="Stepanauskas R">R Stepanauskas</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Thompson, Lr" uniqKey="Thompson L">LR Thompson</name>
</author>
<author><name sortKey="Zeng, Q" uniqKey="Zeng Q">Q Zeng</name>
</author>
<author><name sortKey="Kelly, L" uniqKey="Kelly L">L Kelly</name>
</author>
<author><name sortKey="Huang, Kh" uniqKey="Huang K">KH Huang</name>
</author>
<author><name sortKey="Singer, Au" uniqKey="Singer A">AU Singer</name>
</author>
<author><name sortKey="Stubbe, J" uniqKey="Stubbe J">J Stubbe</name>
</author>
<author><name sortKey="Chisholm, Sw" uniqKey="Chisholm S">SW Chisholm</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Waldor, Mk" uniqKey="Waldor M">MK Waldor</name>
</author>
<author><name sortKey="Mekalanos, Jj" uniqKey="Mekalanos J">JJ Mekalanos</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Weinbauer, Mg" uniqKey="Weinbauer M">MG Weinbauer</name>
</author>
</analytic>
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<biblStruct><analytic><author><name sortKey="Winstanley, C" uniqKey="Winstanley C">C Winstanley</name>
</author>
<author><name sortKey="Langille, Mgi" uniqKey="Langille M">MGI Langille</name>
</author>
<author><name sortKey="Fothergill, Jl" uniqKey="Fothergill J">JL Fothergill</name>
</author>
<author><name sortKey="Kukavica Ibrulj, I" uniqKey="Kukavica Ibrulj I">I Kukavica-Ibrulj</name>
</author>
<author><name sortKey="Paradis Bleau, C" uniqKey="Paradis Bleau C">C Paradis-Bleau</name>
</author>
<author><name sortKey="Sanschagrin, F" uniqKey="Sanschagrin F">F Sanschagrin</name>
</author>
<author><name sortKey="Thomson, Nr" uniqKey="Thomson N">NR Thomson</name>
</author>
<author><name sortKey="Winsor, Gl" uniqKey="Winsor G">GL Winsor</name>
</author>
<author><name sortKey="Quail, Ma" uniqKey="Quail M">MA Quail</name>
</author>
<author><name sortKey="Lennard, N" uniqKey="Lennard N">N Lennard</name>
</author>
<author><name sortKey="Bignell, A" uniqKey="Bignell A">A Bignell</name>
</author>
<author><name sortKey="Clarke, L" uniqKey="Clarke L">L Clarke</name>
</author>
<author><name sortKey="Seeger, K" uniqKey="Seeger K">K Seeger</name>
</author>
<author><name sortKey="Saunders, D" uniqKey="Saunders D">D Saunders</name>
</author>
<author><name sortKey="Harris, D" uniqKey="Harris D">D Harris</name>
</author>
<author><name sortKey="Parkhill, J" uniqKey="Parkhill J">J Parkhill</name>
</author>
<author><name sortKey="Hancock, Rew" uniqKey="Hancock R">REW Hancock</name>
</author>
<author><name sortKey="Brinkman, Fsl" uniqKey="Brinkman F">FSL Brinkman</name>
</author>
<author><name sortKey="Levesque, Rc" uniqKey="Levesque R">RC Levesque</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Wommack, Ke" uniqKey="Wommack K">KE Wommack</name>
</author>
<author><name sortKey="Colwell, Rr" uniqKey="Colwell R">RR Colwell</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Yoon, Hs" uniqKey="Yoon H">HS Yoon</name>
</author>
<author><name sortKey="Price, Dc" uniqKey="Price D">DC Price</name>
</author>
<author><name sortKey="Stepanauskas, R" uniqKey="Stepanauskas R">R Stepanauskas</name>
</author>
<author><name sortKey="Rajah, Vd" uniqKey="Rajah V">VD Rajah</name>
</author>
<author><name sortKey="Sieracki, Me" uniqKey="Sieracki M">ME Sieracki</name>
</author>
<author><name sortKey="Wilson, Wh" uniqKey="Wilson W">WH Wilson</name>
</author>
<author><name sortKey="Yang, Ec" uniqKey="Yang E">EC Yang</name>
</author>
<author><name sortKey="Duffy, S" uniqKey="Duffy S">S Duffy</name>
</author>
<author><name sortKey="Bhattacharya, D" uniqKey="Bhattacharya D">D Bhattacharya</name>
</author>
</analytic>
</biblStruct>
<biblStruct><analytic><author><name sortKey="Zhou, Y" uniqKey="Zhou Y">Y Zhou</name>
</author>
<author><name sortKey="Liang, Y" uniqKey="Liang Y">Y Liang</name>
</author>
<author><name sortKey="Lynch, Kh" uniqKey="Lynch K">KH Lynch</name>
</author>
<author><name sortKey="Dennis, Jj" uniqKey="Dennis J">JJ Dennis</name>
</author>
<author><name sortKey="Wishart, Ds" uniqKey="Wishart D">DS Wishart</name>
</author>
</analytic>
</biblStruct>
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